sgkit.variables.genotype_count_spec¶
- sgkit.variables.genotype_count_spec = ArrayLikeSpec(default_name='genotype_count', __doc__='\nGenotype counts. Must correspond to an (`N`, 3) array where `N` is equal\nto the number of variants and the 3 columns contain heterozygous,\nhomozygous reference, and homozygous alternate counts (in that order)\nacross all samples for a variant.\n', kind='i', ndim=2)¶
Genotype counts. Must correspond to an (N, 3) array where N is equal to the number of variants and the 3 columns contain heterozygous, homozygous reference, and homozygous alternate counts (in that order) across all samples for a variant.