sgkit.variables.genotype_counts_spec¶

sgkit.variables.genotype_counts_spec = ArrayLikeSpec(default_name='genotype_counts', kind='i', ndim=2)¶: Genotype counts. Must correspond to an (N, 3) array where N is equal to the number of variants and the 3 columns contain heterozygous, homozygous reference, and homozygous alternate counts (in that order) across all samples for a variant.